Ontology Alignment Evaluation Initiative

OAEI-related Special Issues

Ontology Alignment: Algorithms and Evaluation

(Incomplete) List of the special issue papers published in the Knowledge Engineering Review journal:

• Jomar Da Silva, Kate Revoredo, Fernanda Baião, Jérôme Euzenat. Alin: improving interactive ontology matching by interactively revising mapping suggestions. [url][pdf]


• Naouel Karam, Abderrahmane Khiat, Alsayed Algergawy, Melanie Sattler, Claus Weiland, Marco Schmidt. Matching biodiversity and ecology ontologies: challenges and evaluation results. [url]


• Majid Mohammadi, Wout Hofman, Yao-Hua Tan. SANOM-HOBBIT: simulated annealing-based ontology matching on HOBBIT platform. [url][pdf]


• Huanyu Li, Zlatan Dragisic, Daniel Faria, Valentina Ivanova, Ernesto Jiménez-Ruiz, Patrick Lambrix, Catia Pesquita. User validation in ontology alignment: functional assessment and impact. [url][pdf]


• Lu Zhou, Elodie Thiéblin, Michelle Cheatham, Daniel Faria, Catia Pesquita, Cassia Trojahn, Ondřej Zamazal. Towards evaluating complex ontology alignments. [url][pdf]


• Daniel Faria, Alfio Ferrara, Ernesto Jiménez-Ruiz, Stefano Montanelli, Catia Pesquita. Crowd-assessing quality in uncertain data linking datasets. [url][pdf]


• Elodie Thiéblin, Michelle Cheatham, Cassia Trojahn, Ondřej Zamazal. A consensual dataset for complex ontology matching evaluation. [url][pdf]

Ontology Alignment in Life Sciences

Papers published in the special issue of the Journal of Biomedical Semantics (JBMS):

• Ian Harrow, Ernesto Jiménez-Ruiz, Andrea Splendiani, Martin Romacker, Peter Woollard, Scott Markel, Yasmin Alam-Faruque, Martin Koch, James Malone and Arild Waaler. Matching disease and phenotype ontologies in the ontology alignment evaluation initiative. [url]


• Zlatan Dragisic, Valentina Ivanova, Huanyu Li and Patrick Lambrix. Experiences from the anatomy track in the ontology alignment evaluation initiative. [url]


• Miguel Ángel Rodríguez-García, Georgios V. Gkoutos, Paul N. Schofield and Robert Hoehndorf. Integrating phenotype ontologies with PhenomeNET. [url]


• Daniel Faria, Catia Pesquita, Isabela Mott, Catarina Martins, Francisco M. Couto and Isabel F. Cruz. Tackling the challenges of matching biomedical ontologies. [url]


• Mengyi Zhao, Songmao ZhangEmail author, Weizhuo Li and Guowei Chen. Matching biomedical ontologies based on formal concept analysis. [url]